
Professor in Residence
Lab Role
+1 415 353-3442
short description of what you do
Publications
Searching for the cellular underpinnings of the selective vulnerability to tauopathic insults in Alzheimer's disease.
Communications biology
Modelling pathological spread through the structural connectome in the frontotemporal dementia clinical spectrum.
Brain : a journal of neurology
Beyond the Buzz: Cortical and subcortical brain changes in patients with pulsatile tinnitus.
NeuroImage. Clinical
Integrative, segregative, and degenerate harmonics of the structural connectome.
Communications biology
Understanding the complex interplay between tau, amyloid and the network in the spatiotemporal progression of Alzheimer's Disease.
bioRxiv : the preprint server for biology
Directionality bias is necessary to explain spatiotemporal progression of pathology in mouse models of tauopathy.
bioRxiv : the preprint server for biology
Spectral graph model for fMRI: a biophysical, connectivity-based generative model for the analysis of frequency-resolved resting state fMRI.
bioRxiv : the preprint server for biology
Impaired long-range excitatory time scale predicts abnormal neural oscillations and cognitive deficits in Alzheimer's disease.
Alzheimer's research & therapy
Selective vulnerability and resilience to Alzheimer's disease tauopathy as a function of genes and the connectome.
bioRxiv : the preprint server for biology
Cellular underpinnings of the selective vulnerability to tauopathic insults in Alzheimer's disease.
bioRxiv : the preprint server for biology
Cortical Synchrony and Information Flow during Transition from Wakefulness to Light Non-Rapid Eye Movement Sleep.
The Journal of neuroscience : the official journal of the Society for Neuroscience
Impaired long-range excitatory time scale predicts abnormal neural oscillations and cognitive deficits in Alzheimer's disease.
Research square
Bayesian Inference of a Spectral Graph Model for Brain Oscillations.
bioRxiv : the preprint server for biology
Stability and dynamics of a spectral graph model of brain oscillations.
Network neuroscience (Cambridge, Mass.)
The effects of microglia on tauopathy progression can be quantified using Nexopathy in silico (Nexis) models.
Scientific reports
Editorial: Advances in brain functional and structural networks modeling via graph theory.
Frontiers in neuroscience
Structure-function models of temporal, spatial, and spectral characteristics of non-invasive whole brain functional imaging.
Frontiers in neuroscience
Connectome-based biophysics models of Alzheimer's disease diagnosis and prognosis.
Translational research : the journal of laboratory and clinical medicine
Matrix Inversion and Subset Selection (MISS): A pipeline for mapping of diverse cell types across the murine brain.
Proceedings of the National Academy of Sciences of the United States of America
Predicting Functional Connectivity From Observed and Latent Structural Connectivity via Eigenvalue Mapping.
Frontiers in neuroscience
Emergence of directional bias in tau deposition from axonal transport dynamics.
PLoS computational biology
Combined Model of Aggregation and Network Diffusion Recapitulates Alzheimer's Regional Tau-Positron Emission Tomography.
Brain connectivity
Network-constrained technique to characterize pathology progression rate in Alzheimer's disease.
Brain communications
Graph Models of Pathology Spread in Alzheimer's Disease: An Alternative to Conventional Graph Theoretic Analysis.
Brain connectivity
Population-based input function for TSPO quantification and kinetic modeling with [11C]-DPA-713.
EJNMMI physics
Molecular Imaging of Striatal Dopaminergic Neuronal Loss and the Neurovascular Unit in Parkinson Disease.
Frontiers in neuroscience
A dictionary-based graph-cut algorithm for MRI reconstruction.
NMR in biomedicine
Origins of atrophy in Parkinson linked to early onset and local transcription patterns.
Brain communications
Network mediation of pathology pattern in sporadic Creutzfeldt-Jakob disease.
Brain communications
Spectral graph theory of brain oscillations.
Human brain mapping
Stereotaxic Diffusion Tensor Imaging White Matter Atlas for the in vivo Domestic Feline Brain.
Frontiers in neuroanatomy
Dynamical Role of Pivotal Brain Regions in Parkinson Symptomatology Uncovered with Deep Learning.
Brain sciences
Neural connectivity predicts spreading of alpha-synuclein pathology in fibril-injected mouse models: Involvement of retrograde and anterograde axonal propagation.
Neurobiology of disease
Regional transcriptional architecture of Parkinson's disease pathogenesis and network spread.
Brain : a journal of neurology
Longitudinal increases in structural connectome segregation and functional connectome integration are associated with better recovery after mild TBI.
Human brain mapping
Slow-gamma frequencies are optimally guarded against effects of neurodegenerative diseases and traumatic brain injuries.
Journal of computational neuroscience
Editorial: Network Spread Models of Neurodegenerative Diseases.
Frontiers in neurology
Normal diffusivity of the domestic feline brain.
The Journal of comparative neurology
Models of Network Spread and Network Degeneration in Brain Disorders.
Biological psychiatry. Cognitive neuroscience and neuroimaging
A method for inferring regional origins of neurodegeneration.
Brain : a journal of neurology
Functional brain connectivity is predictable from anatomic network's Laplacian eigen-structure.
NeuroImage
Regional expression of genes mediating trans-synaptic alpha-synuclein transfer predicts regional atrophy in Parkinson disease.
NeuroImage. Clinical
Regional vulnerability in Alzheimer's disease: The role of cell-autonomous and transneuronal processes.
Alzheimer's & dementia : the journal of the Alzheimer's Association
Preserved Structural Network Organization Mediates Pathology Spread in Alzheimer's Disease Spectrum Despite Loss of White Matter Tract Integrity.
Journal of Alzheimer's disease : JAD
Predictive Model of Spread of Progressive Supranuclear Palsy Using Directional Network Diffusion.
Frontiers in neurology
Analysis of Amyloid-β Pathology Spread in Mouse Models Suggests Spread Is Driven by Spatial Proximity, Not Connectivity.
Frontiers in neurology
Age-Related Changes in Topological Degradation of White Matter Networks and Gene Expression in Chronic Schizophrenia.
Brain connectivity
Mature Hippocampal Neurons Require LIS1 for Synaptic Integrity: Implications for Cognition.
Biological psychiatry
Connectivity, not region-intrinsic properties, predicts regional vulnerability to progressive tau pathology in mouse models of disease.
Acta neuropathologica communications
Brain network eigenmodes provide a robust and compact representation of the structural connectome in health and disease.
PLoS computational biology
MRI Analysis of White Matter Myelin Water Content in Multiple Sclerosis: A Novel Approach Applied to Finding Correlates of Cortical Thinning.
Frontiers in neuroscience
The Brain's Structural Connectome Mediates the Relationship between Regional Neuroimaging Biomarkers in Alzheimer's Disease.
Journal of Alzheimer's disease : JAD
Network Analysis on Predicting Mean Diffusivity Change at Group Level in Temporal Lobe Epilepsy.
Brain connectivity
Diffuse reduction of cerebral grey matter volumes in Erdheim-Chester disease.
Orphanet journal of rare diseases
Structural connectome disruption at baseline predicts 6-months post-stroke outcome.
Human brain mapping
Profilometry: A new statistical framework for the characterization of white matter pathways, with application to multiple sclerosis.
Human brain mapping
Relating Cortical Atrophy in Temporal Lobe Epilepsy with Graph Diffusion-Based Network Models.
PLoS computational biology
Measuring longitudinal myelin water fraction in new multiple sclerosis lesions.
NeuroImage. Clinical
Feasibility and reproducibility of whole brain myelin water mapping in 4 minutes using fast acquisition with spiral trajectory and adiabatic T2prep (FAST-T2) at 3T.
Magnetic resonance in medicine
Exploring the brain's structural connectome: A quantitative stroke lesion-dysfunction mapping study.
Human brain mapping
Simultaneous phase unwrapping and removal of chemical shift (SPURS) using graph cuts: application in quantitative susceptibility mapping.
IEEE transactions on medical imaging
Widespread white matter degeneration preceding the onset of dementia.
Alzheimer's & dementia : the journal of the Alzheimer's Association
Spatial patterns of genome-wide expression profiles reflect anatomic and fiber connectivity architecture of healthy human brain.
Human brain mapping
Predicting future brain tissue loss from white matter connectivity disruption in ischemic stroke.
Stroke
Discriminative random field segmentation of lung nodules in CT studies.
Computational and mathematical methods in medicine
Robust myelin quantitative imaging from multi-echo T2 MRI using edge preserving spatial priors.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention
The Network Modification (NeMo) Tool: elucidating the effect of white matter integrity changes on cortical and subcortical structural connectivity.
Brain connectivity
Loss in connectivity among regions of the brain reward system in alcohol dependence.
Human brain mapping
Bayesian algorithm using spatial priors for multiexponential T₂ relaxometry from multiecho spin echo MRI.
Magnetic resonance in medicine
T2 prep three-dimensional spiral imaging with efficient whole brain coverage for myelin water quantification at 1.5 tesla.
Magnetic resonance in medicine
A pilot study of quantitative MRI measurements of ventricular volume and cortical atrophy for the differential diagnosis of normal pressure hydrocephalus.
Neurology research international
A fast Edge-preserving Bayesian reconstruction method for Parallel Imaging applications in cardiac MRI.
Magnetic resonance in medicine
Visualization and segmentation of liver tumors using dynamic contrast MRI.
Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
A maximum likelihood approach to parallel imaging with coil sensitivity noise.
IEEE transactions on medical imaging
Fast and stable bayesian image expansion using sparse edge priors.
IEEE transactions on image processing : a publication of the IEEE Signal Processing Society
Bayesian parallel imaging with edge-preserving priors.
Magnetic resonance in medicine
Automatic algorithm for correcting motion artifacts in time-resolved two-dimensional magnetic resonance angiography using convex projections.
Magnetic resonance in medicine
Improved signal-to-noise ratio in parallel coronary artery magnetic resonance angiography using graph cuts based Bayesian reconstruction.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference
Statistical aspects of parallel imaging reconstruction.
Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference